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Recalibration of the Stammler_2016_16S_spikein dataset2 years ago
Import data | Ids of the spike-in bacteria | Recalibrate based on Salinibacter ruber abundance. | A more convenient way using the scml function included in the package: | Session information
Recalibration of the Stammler_2016_16S_spikein dataset2 years ago
Import data | Ids of the spike-in bacteria | Recalibrate based on Salinibacter ruber abundance. | A more convenient way using the scml function included in the package: | Session information
bugphyzz2 years ago
Introduction | Data schema | Analysis and Stats | Installation | Import bugphyzz data | Create microbial signatures | Run a bug set enrichment analysis | Get signatures associated with a specific microbe | Session information
Sources2 years ago
bugphyzz2 years ago
Introduction | Data schema | Analysis and Stats | Installation | Import bugphyzz data | Create microbial signatures | Run a bug set enrichment analysis | Get signatures associated with a specific microbe | Session information
Sources2 years ago
Datasets in MicrobiomeBenchmarkData4 years ago
MicrobiomeBenchmarkData4 years ago
Introduction | Installation | Sample metadata | Accessing datasets | Print avaialable datasets | Access a single dataset | Access a few datasets | Access all of the datasets | Annotations for each taxa are included in rowData | Cache | Session information
Datasets in MicrobiomeBenchmarkData4 years ago
MicrobiomeBenchmarkData4 years ago
Introduction | Installation | Sample metadata | Accessing datasets | Print avaialable datasets | Access a single dataset | Access a few datasets | Access all of the datasets | Annotations for each taxa are included in rowData | Cache | Session information